Tab Mapper

1. This workflow will guide you through tissue sampling an experiment

   Tissue samples collected from the field are linked to a single plant, which is in turn linked to a single plot.

   Many tissue samples can be created for each plant.

   Each tissue sample has a globally unique name.

   
   

   A unique tissue sample is present in each well of a genotyping plate (96 or 384 well plates).

   The tissue sample in a 96 well plate can originate from another tissue sample name, plant name, plot name, or accession name.

   
   
   Go to Next Step

2. At which level do you plan to keep track of your sampling?

      Accession Level: The sample is not from a field trial entity and only the accession name is known.
      Plot Level: Each plot in the field has a unique identifier, ideally with a barcode label.
      Plant Level: Each plant in the field has a unique identifier, ideally with a barcode label.
      Tissue Sample Level: Each tissue sample collected from the field has a unique identifier, ideally with a barcode label.
   
   Go to Next Step

3. Select a field trial

   Field trial is not relevant for the type of tissue sampling you selected. Go to next step.

   Go to Next Step

   Select	Trial name	Description	Breeding program	Folder	Year	Location	Trial type	Design	Planting Date	Harvest Date	Download

   
   
   Go to Next Step

4. Plant entries in your field trial

   Plant entries not relevant for the type of tissue sampling you selected. Go to next step.

   Go to Next Step

   Plant entries exist for this trial. Go to next step.

   Go to Next Step

   Please create plant entries for this trial.

   Number of plants per plot:

   Inherits Management Factor(s) From Plots:

   
   Submit

5. Create tissue sample entries for this trial

   Field trial tissue sample entries not relevant for the type of tissue sampling you selected. Go to next step.

   Go to Next Step

   Tissue sample entries exist for this trial. Go to next step.

   Go to Next Step
     Number of tissue samples per plant:

   Inherits Management Factor(s) From Plots:

   
   Submit

1. This workflow will guide you through uploading a new trial or trials into the database

   A field trial represents plots in the field where each plot has a globally unique plot_name, a sequential plot_number that is unique in the trial (e.g. 101, 102, 103 for three separate plots), and an accession_name representing the genotype being tested in that plot. In cases where a cross/family is being evaluated (e.g. F1 hybrid, backcrossing), a cross_unique_id or a family_name can be used instead of an accession_name. Each plot can belong to different blocks (block_number) and reps (rep_number) depending on the experimental design you are using (e.g. complete block vs augmented design). Each plot can have a row_number and col_number indicating the relative position of the plot in the field.

   If a specific accession is a check or control, you can indicate the plots that that accession is planted in as controls using is_a_control.

   You can provide the specific seedlot_name planted in each plot, along with the number of seeds (num_seed_per_plot) and/or the weight (g) of seed (weight_gram_seed_per_plot) that were used.

   A trial can represent a yield trial, a phenotyping trial, a crossing block, a greenhouse, a nursery, etc.

   A plot can have many plants, which the database can track as separate entities, allowing you to record plant level observations and information.

   
   
   Go to Next Step
2. • Single Trial Design
   • Multiple Trial Designs

   File format information Single trial spreadsheet

   Go to Next Step
   
   

   Single Trial Designs may be uploaded using any of the supported file types: MS Excel (.xls or .xlsx), comma-separated file (.csv), tab-delimited file (.txt or .tsv), or semicolon-separated file (.ssv).

   Optional columns may be left out, if not used in your data.

   File format information Multiple trial spreadsheet

   
   

   Ignore Warnings:

   Email Alert:

   Email:

   
   Upload Trial Designs Reload Page
   
   

   Multiple Trial Designs may be uploaded using any of the supported file types: MS Excel (.xls or .xlsx), comma-separated file (.csv), tab-delimited file (.txt or .tsv), or semicolon-separated file (.ssv).

   Optional columns may be left out, if not used in your data.

3. Enter information about the experiment and upload your trial layout

   Trial Name:
   Breeding Program:

   5CPBTICARICHCIATCIP-genebankCNRACornellCSIR-CRIEmbrapaIDIAFIITAINERA_IITA_DRCISABUITCKALROKUNaCRRINRCRIRayongSLARITARIUACUHUNILA-IndonesiaZARI
   Location:

   RestrepoIgbariamRayongGranadaSanto Tomas. Atlantico, ColombiaFlorenciabwangaNaliendeleKokrokoChokweCalabarJaguaripe (BA) - Fazenda EsperançaCorozal. Sucre, ColombiaAgborSuakokoKibahaIshiaguBarahonaNjalaSotoubouaBuenos AiresAlbaniaItanhem (BA)IlorinAcacias. Meta, ColombiaVerdelandia (MG)-Brasnica Fazenda OrienteCIATDarien. Valle, ColombiaEl Espinal. Tolima, ColombiaTerra Alta (PA)Kano[Computation]Puerto Caicedo. Putumayo, ColombiaFlorestal (MG) - UFV Campus FlorestalLUWEEROMatazulAkwa IbomLaje (BA)-RoqueEjuraVilla Garzon. Putumayo, ColombiaLuruacoHomboloQuilcace. Cauca, ColombiaTumacoCaribiaOvejasMomilLomeMukonoSabanagrandeBlamaSao Mateus (ES)KiggumbaNjuliMakokaZariaIbadanArmeroZomboAnlong Veng District, Oddar Meanchey provinceMutata. Antioquia, ColombiaAguazulValencia. Cordoba, ColombiaQuang NgaiAgustin CodazziMakeniKabalaNametilPalmiraBolivarKwaraKazilamuyagaTamalameque. Cesar, ColombiaBaranoa. Atlantico, ColombiaEsplanada (BA) - CachoeiraUkereweNhacoongoLaje (BA)-GaviaoMangabeira (BA)-IF BaianoGairoBuginyanyaMarukuMtwapa2Varzedo (BA)UmbeluziSao Francisco de Itabapoana (RJ)-Industria Dona ChicaPolonuevoBukembaRufunsaCampos Novos Paulista (SP)-Tereos SyralOgoniInharrimeBulingaUyoEmbuBarrancabermejaDarienCereteFumesuaSiayaCarimagua. Meta, ColombiaMacapa (AP)SabanalargaEl Overo. Valle, ColombiaCaldonoPallisaSabanalarga. Atlantico, ColombiaKhao Hinsorn Research Center, Kasetsart University, Chachoengsao provinceRatanak Mondul district, Battambang provinceMasakaEl Olivo. Cordoba, ColombiaApiayVitoria da Conquista (BA) - Fecularia ConquistaMvuaziKaberamaidoSulutiSan Vicente. Santander, ColombiaMontenegro. Quindio, ColombiaTouros (RN)-PrataBusiaunspecifiedMutataSanta CruzUniversity of HawaiiAkureOhawuCarepaLirakasuluApiay. Meta, ColombiaBugaPetrolina (PE)-UNIVASFPatiaMichikichiniItasyAgo-OwuPopayanDoncello. Caqueta, ColombiaDivoPajau. Brasil, BrazilQuilcaceFlorencia. Caqueta, ColombiaChiengiTangakonaOtobiMontenegroPuerto GaitanBarranquilla. Atlantico, ColombiaCorozalPinheiros (ES)MontanitaJeddoLao NgamSikhiu is a district (amphoe) in the western part of Nakhon Ratchasima provinceCienaga. Magdalena, ColombiaBela Vista de Goias (GO)TolúMarechal Candido Rondon (PR)-ATIMOPEl EspinalHoma BayArmeniaTESTKisesaAssin FosuBundaYopal. Casanare, ColombiabadagryObuduNaphokLa Dolores. Valle, ColombiaNamulonge-SendusuSenjehSampues. Sucre, ColombiaCajibioCoração de Maria (BA)GongoniLa HormigaRakaiPalmasecaChitedzeLoricaCruz das Almas (BA)-UFRB-CandealMargibiTracuateua (PA)TolúviejoPopayan. Cauca, ColombiaAcaciasTauramenaKipopoAgbarhoCIAT. Valle, ColombiaNgandajikaMkurangaOrito. Putumayo, ColombiaPuerto Asis. Putumayo, ColombiaCumaral. Meta, ColombiaRubiriziBuikweKalomoSan Martin. Meta, ColombiaMityanaOsunKiyakaPivijaySinceMontanita. Sucre, ColombiaConde (BA)-CanguritoNyankpalaVitoria da Conquista (BA)Prado (BA)MbuniHung YenLaje (BA) - Fazenda Sombra VerdeDeltaBoyce Thompson InstitutePitalitoKasinthukaPuerto AsisMorogoroMkondeziAbujaMonteria (UNICORDOBA). Cordoba, ColombiaWenchiSan VicenteCaracoli. Atlantico, ColombiaMokwaKebbiAlupeCapanema (PA)RubonaChatoCalotoUsiacuriSanta Cruz. Atlantico, ColombiaLa Hormiga. Putumayo, ColombiaMonteriaLaje (BA)-Rio de Areia 1Rio Frio. Magdalena, ColombiaTeresina (PI)OnneOrtegaIresiYopalFonsecaKabangweCaracoliEl Salado. Cordoba, ColombiaPuerto LopezLagoa D'Anta (RN)ManLagoa D'anta (RN)-LopesKWALEPuerto Gaitan. Meta, ColombiaConceicao dos Ouros (MG)Pojuca (BA)RiversMedia Luna. Magdalena, ColombiaFadaInaAremasain. Guajira, ColombiaBambiLukwakwaMalambo. Atlantico, ColombiaCornell BiotechChilimbaLoroSerereRio FrioDoncelloPalmar de VarelaMogovolasFumesua-KumasiSan Antonio de PalmitoSon LaMtwapaWarriNachingweaBulegeniVerdelandia (MG)-Brasnica Fazenda VilyamaZanzibarTapioca Development Institute (TDI), located in Huay Bong, Dan Khun Thot District, Nakhon RatchasimaPhu YenJamundi. Valle, ColombiaMalamboPureza (RN)Puerto Lopez. Meta, ColombiaFarakobaHanoiNgomaKasuluSevillaItamaraju (BA)Ban Khao Luk Chang, Ta Phraya Sistrict, Sa Kaeo provinceCienagaS. de Quilichao. Cauca, ColombiaEl MiraEdoGuanambi (BA)-IF BaianoCruz Das Almas (BA) - UFRB CAMABSerra dos Aimores (MG)-Cachoeira da MataMahondaLlanosVilla GarzonArmenia. Quindio, ColombiaMarataizes (ES)LiupoLaje (BA)-Rio de Areia 1MigoriWakisoCruz das Almas (BA)-UFRB-PP1GbarpoluEketPuerto CaicedoBarranca De Upia. Casanare, ColombiaLa Libertad. Meta, ColombiaLaberinto. Sucre, ColombiaCrossRiverMondomoLondrina (PR-Afapo)Teixeira de Freitas (BA)El Carmen. Bolivar, ColombiaMimoso do Sul (ES)CarimaguaTay NinhBayelsaValledupar. Cesar, ColombiaPonta Pora (MS)-Assentamento ItamaratiMogincualBuenaventuraBouakeItiuba (BA)San PabloKisesa-MaguEl SaladoDewoinBanteay Meanchey province Banteay MeancheyMulunguMsambweniNgabuCandelaria. Valle, ColombiaAlagoinhas (BA)-Boa UniaoNecocliCaloto. Cauca, ColombiaCabuyaro. Meta, ColombiaIkenneSan MartinSoeng Sang is a district in the southeastern part of Nakhon Ratchasima provinceInhambupe (BA)-BotelhoThateng district, Sekong provinceBuga. Valle, ColombiaCantaclaroS. de QuilichaoCorozal. Sucre, ColombiaNational Corn and Sorghum Research Center (Suwan Farm), Kasetsart University Nakhon Ratchasima provinceLuruaco. Atlantico, ColombiaLa Libertad. Meta, ColombiaIlesaPend. , ColombiaCerete. Cordoba, ColombiaVijes. Valle, ColombiaNaCRRI, Central UgandaLa UnionRokuprUnknownunknown2MbararaAugusto Correa (PA)MuhangaAzuaRwebitabadavieNiaouliJamundiChamkar Leu districtBarranquillaAtivemeNgettaGranada. Meta, ColombiaCampecheJosIBARAPAEl Carmen de BolivarChambeziMomil. Cordoba, ColombiaFrancisco PizarroSatiro Dias (BA)-Assentamento PapagaioPalmaseca. Valle, ColombiaLaje (BA)-Novo Horizonte 2ASan PedroCienaga De Oro. Cordoba, ColombiaMalam MadoriKumasiKamaConde (BA)-HumaitaRepelon. Atlantico, ColombiaNecocli. Antioquia, ColombiaCorpoica PalmiraBetuliaLaje (BA)-Rio de Areia 2MocubaNigerDanyiTororoKizimbaniFonseca. Guajira, ColombiaOshogboKaomaPitalito. Atlantico, ColombiaLaberintoAdetaSantaguedaKakamegaTchadNsukkaCabuyaroNamulongeKubwaIRRUADong NaiLa LibertadLaje (BA)-Fazenda Sao JorgekaseseBaranoaPalmar de Varela. Atlantico, ColombiaMatazul. Meta, ColombiaBwangaKisumuPescador. Cauca, ColombiaLaje (BA)-RogerioSahagun. Cordoba, ColombiaSabanalarga. Atlantico, ColombiaNgettaCarranzo. Cordoba, ColombiaMoralesSampuesChinuPouso Alegre (MG)Cajibio. Cauca, ColombiaLaje (BA)-Novo Horizonte 1YangambiNebbiPokuaseDaklakMorales. Cauca, ColombiaNyagatareMontanha (ES) - Fecularia ConquistaKibaaleBarranca De UpiaEl OveroArmero. Tolima, ColombiaCarepa. Antioquia, ColombiaSahagunLa Union. Sucre, ColombiaAlcobaca (BA)KilibaBetulia. Sucre, ColombiaAlbania. Sucre, ColombiaKaseseCIAT. Valle, ColombiaAbidjanPendembuMsabahaBarrancabermeja. Santander, ColombiaChinu. Cordoba, ColombiaUkiriguruOritolossaVijesLaje (BA)-Novo Horizonte 2BBolikham district, Bolikhamxay provinceCruz Das Almas (BA)-CNPMF-Area 2DamongoPatia. Cauca, ColombiaUmudikeRestrepo. Meta, ColombiaNeivaCostaRepelonSanto TomasChitalaEntre Rios (BA)ChochoLaje (BA) - CapelaQuissama (RJ)-PMQ HortoKadunaweBom Jesus da Lapa (BA) - IF BaianoEkitiPitalito. Atlantico, ColombiaOgutaNong Yai is a district in the province ChonburiCandelariaMolineros. Atlantico, ColombiaPescadorWenchi-BALa CumbreLaje (BA) - RailtonSanta Isabel do Para (PA)Santo Tomas. Atlantico, ColombiaMedia LunaEl OlivoTauramena. Casanare, ColombiaCumaralCaribia. Magdalena, ColombiaValleduparFloridaMondomo. Cauca, ColombiaMotiloniaAguazul. Casanare, ColombiaLaje (BA)-Novo RumoCienaga De OroStung Treng Province, Stung TrengPokuase-AccraEuclides da Cunha (BA)AKUMADANCruz Das Almas (BA) - UFRB - EstabuloAremasainLaje (BA)-Novo Horizonte 1AKibosKamuliLa DoloresAlagoinhas (BA)COLDStore, RACK1, Shelf2, Cruz Das Almas (BA) CNPMF - CitrusRuziziPlainIkot AfangaBengouPivijay. Magdalena, ColombiaKogiAruaAgenbodeValenciaNatagaimaCampos dos Goytacazes (RJ)-UENFILONGABundibugyoEgbemaKakonkoMubendeSanto Amaro (BA)BarrancasCachoeira de Minas (MG)Dourados (MS)-UFGDDOKOLOCruz Das Almas (BA) - CNPMF - Area 1 (Ladeira maracuja)Los PalmitosibadanGinebraMansaUbiaja
   Trial Type:
   Year:
   Planting Date (MM-DD-YYYY):
   Transplanting Date(MM-DD-YYYY):
   Plot Width (m):
   Plot Length (m):
   Field Size (ha):
   Plants per Plot:

   Creates plant entries for each plot. Ignore if not adding plant entries.

   Inherits Management Factor(s) From Plots:
   Description:
   Stock Type Being Evaluated in Trial:

   Select a stock type accession cross family_name
   Design Type:

   Completely Randomized Complete Block Resolvable Row-Column Doubly-Resolvable Row-Column Augmented Row-Column Alpha Lattice Lattice Augmented Modified Augmented Design Nursery/Greenhouse Split Plot Strip Plot Partially Replicated Westcott
   Upload File:
   
   
   Go To Next Step

4. Is your trial linked with other field trials, genotyping plates, or crossing experiments in the database? If you are unsure, you can skip this. This information can be added from the trial detail page after the trial is saved.

   Is this trial following-up a previous field trial?:

   No Yes

   Select the trial(s) which preceded this trial:

   If you go on to collect tissue samples for creating a 96 well plate for genotyping, when adding the genotyping plate (96 well plate layout) to the database you can use plot names or plant names or tissue sample names from this field trial. By doing so, we can create linkage between this field trial and the genotyping plate.

   Will this trial be genotyped?:

   No Yes

   If you go on to perform crosses on this field trial, each cross can be linked to specific female and male plots. When you upload these crosses we can then automatically link this field trial to the crossing experiment in the database.

   Will crosses be done on this trial?:

   No Yes
   
   

   Check this box to ignore any possible warning messages and save the trial to the database.

   Ignore Warnings?:
   
   First validate the form Upload Trial

5. Fixing the missing accession(s) problem

   • Accessions tested in your trial must exist in the database prior to adding your trial. The reason for this is that an accession can be tested in many trials and therefore exists as a separate entity in the database. We also want to be careful about adding new accessions into the database because we do not want incorrectly duplicated data.
   • When adding accessions into the database, you can use either a list of accessions or an Excel file.

   Add your accessions to the database
   
   Once all your accessions are in the database Click Here
   
   

   Trial Upload Error Messages

6. Fixing the missing seedlot(s) problem

   • Seedlots tested in your experimental trial must exist in the database prior to adding your trial. The reason for this is that a seedlot can be tested in many trials and therefore exists as a separate entity in the database. We also want to be careful about adding new seedlots into the database because we do not want data to be incorrectly linked to duplicates.

   • When adding seedlots into the database, you can upload an Excel file or you can add seedlots one at a time.
     
     
     • Upload Excel file
       
       
     • Add One Seedlot

   
   Once all your seedlots are in the database Click Here
   
   

   Trial Upload Error Messages

7. Submit your trial again. You should have corrected all errors by now, but if not please take a look at the errors in the red box below. You can continue to modify your file and then click Upload until it works.

   Upload Trial
   
   

   There exist these problems in your file:

1. This workflow will guide you through designing a new trial in the database

   A field trial represents a field where each plot has a globally unique plot name, a sequential plot number that is unique in the trial (e.g. 101, 102, 103 for three separate plots), and an accession representing the genotype being tested in that plot. In cases where crosses/families are being evaluated (e.g. F1 hybrid, backcrossing), cross unique ids or family names can be used instead of accessions. Each plot can belong to different blocks and reps depending on the experimental design you are using (e.g. complete block vs augmented design). Each plot can have a row number and col number indicating the relative position of the plot in the field.

   To design a trial you need to provide a globally unique trial name. The plot names will be generated based on the trial name you provide (e.g. if the trial name is 2018MyTrial, plot_names will be generated like 2018MyTrial_101, 2018MyTrial_102, etc).

   You also need to provide a list of accessions, cross unique ids or family names to use. Based on the design you have picked, the accessions, cross unique ids or family names will be randomized over the blocks or replicates in the trial.

   You can provide a list of accessions to use as controls or checks in your experiment.

   Depending on the design you have picked, you will need to provide different design parameters (e.g. for complete block you will need to provide number of blocks, while for alpha lattice you will need to provide block size and number of replicates.).

   A trial can represent a yield trial, a phenotyping trial, a crossing block, a greenhouse, a nursery, etc.

   A plot can have many plants, which the database can track as separate entities, allowing you to record plant level observations and information.

   
   
   Go to Next Step

2. Enter basic information about the trial

   Breeding Program:

   5CPBTICARICHCIATCIP-genebankCNRACornellCSIR-CRIEmbrapaIDIAFIITAINERA_IITA_DRCISABUITCKALROKUNaCRRINRCRIRayongSLARITARIUACUHUNILA-IndonesiaZARI
   Locations: (One or More)

   RestrepoIgbariamRayongGranadaSanto Tomas. Atlantico, ColombiaFlorenciabwangaNaliendeleKokrokoChokweCalabarJaguaripe (BA) - Fazenda EsperançaCorozal. Sucre, ColombiaAgborSuakokoKibahaIshiaguBarahonaNjalaSotoubouaBuenos AiresAlbaniaItanhem (BA)IlorinAcacias. Meta, ColombiaVerdelandia (MG)-Brasnica Fazenda OrienteCIATDarien. Valle, ColombiaEl Espinal. Tolima, ColombiaTerra Alta (PA)Kano[Computation]Puerto Caicedo. Putumayo, ColombiaFlorestal (MG) - UFV Campus FlorestalLUWEEROMatazulAkwa IbomLaje (BA)-RoqueEjuraVilla Garzon. Putumayo, ColombiaLuruacoHomboloQuilcace. Cauca, ColombiaTumacoCaribiaOvejasMomilLomeMukonoSabanagrandeBlamaSao Mateus (ES)KiggumbaNjuliMakokaZariaIbadanArmeroZomboAnlong Veng District, Oddar Meanchey provinceMutata. Antioquia, ColombiaAguazulValencia. Cordoba, ColombiaQuang NgaiAgustin CodazziMakeniKabalaNametilPalmiraBolivarKwaraKazilamuyagaTamalameque. Cesar, ColombiaBaranoa. Atlantico, ColombiaEsplanada (BA) - CachoeiraUkereweNhacoongoLaje (BA)-GaviaoMangabeira (BA)-IF BaianoGairoBuginyanyaMarukuMtwapa2Varzedo (BA)UmbeluziSao Francisco de Itabapoana (RJ)-Industria Dona ChicaPolonuevoBukembaRufunsaCampos Novos Paulista (SP)-Tereos SyralOgoniInharrimeBulingaUyoEmbuBarrancabermejaDarienCereteFumesuaSiayaCarimagua. Meta, ColombiaMacapa (AP)SabanalargaEl Overo. Valle, ColombiaCaldonoPallisaSabanalarga. Atlantico, ColombiaKhao Hinsorn Research Center, Kasetsart University, Chachoengsao provinceRatanak Mondul district, Battambang provinceMasakaEl Olivo. Cordoba, ColombiaApiayVitoria da Conquista (BA) - Fecularia ConquistaMvuaziKaberamaidoSulutiSan Vicente. Santander, ColombiaMontenegro. Quindio, ColombiaTouros (RN)-PrataBusiaunspecifiedMutataSanta CruzUniversity of HawaiiAkureOhawuCarepaLirakasuluApiay. Meta, ColombiaBugaPetrolina (PE)-UNIVASFPatiaMichikichiniItasyAgo-OwuPopayanDoncello. Caqueta, ColombiaDivoPajau. Brasil, BrazilQuilcaceFlorencia. Caqueta, ColombiaChiengiTangakonaOtobiMontenegroPuerto GaitanBarranquilla. Atlantico, ColombiaCorozalPinheiros (ES)MontanitaJeddoLao NgamSikhiu is a district (amphoe) in the western part of Nakhon Ratchasima provinceCienaga. Magdalena, ColombiaBela Vista de Goias (GO)TolúMarechal Candido Rondon (PR)-ATIMOPEl EspinalHoma BayArmeniaTESTKisesaAssin FosuBundaYopal. Casanare, ColombiabadagryObuduNaphokLa Dolores. Valle, ColombiaNamulonge-SendusuSenjehSampues. Sucre, ColombiaCajibioCoração de Maria (BA)GongoniLa HormigaRakaiPalmasecaChitedzeLoricaCruz das Almas (BA)-UFRB-CandealMargibiTracuateua (PA)TolúviejoPopayan. Cauca, ColombiaAcaciasTauramenaKipopoAgbarhoCIAT. Valle, ColombiaNgandajikaMkurangaOrito. Putumayo, ColombiaPuerto Asis. Putumayo, ColombiaCumaral. Meta, ColombiaRubiriziBuikweKalomoSan Martin. Meta, ColombiaMityanaOsunKiyakaPivijaySinceMontanita. Sucre, ColombiaConde (BA)-CanguritoNyankpalaVitoria da Conquista (BA)Prado (BA)MbuniHung YenLaje (BA) - Fazenda Sombra VerdeDeltaBoyce Thompson InstitutePitalitoKasinthukaPuerto AsisMorogoroMkondeziAbujaMonteria (UNICORDOBA). Cordoba, ColombiaWenchiSan VicenteCaracoli. Atlantico, ColombiaMokwaKebbiAlupeCapanema (PA)RubonaChatoCalotoUsiacuriSanta Cruz. Atlantico, ColombiaLa Hormiga. Putumayo, ColombiaMonteriaLaje (BA)-Rio de Areia 1Rio Frio. Magdalena, ColombiaTeresina (PI)OnneOrtegaIresiYopalFonsecaKabangweCaracoliEl Salado. Cordoba, ColombiaPuerto LopezLagoa D'Anta (RN)ManLagoa D'anta (RN)-LopesKWALEPuerto Gaitan. Meta, ColombiaConceicao dos Ouros (MG)Pojuca (BA)RiversMedia Luna. Magdalena, ColombiaFadaInaAremasain. Guajira, ColombiaBambiLukwakwaMalambo. Atlantico, ColombiaCornell BiotechChilimbaLoroSerereRio FrioDoncelloPalmar de VarelaMogovolasFumesua-KumasiSan Antonio de PalmitoSon LaMtwapaWarriNachingweaBulegeniVerdelandia (MG)-Brasnica Fazenda VilyamaZanzibarTapioca Development Institute (TDI), located in Huay Bong, Dan Khun Thot District, Nakhon RatchasimaPhu YenJamundi. Valle, ColombiaMalamboPureza (RN)Puerto Lopez. Meta, ColombiaFarakobaHanoiNgomaKasuluSevillaItamaraju (BA)Ban Khao Luk Chang, Ta Phraya Sistrict, Sa Kaeo provinceCienagaS. de Quilichao. Cauca, ColombiaEl MiraEdoGuanambi (BA)-IF BaianoCruz Das Almas (BA) - UFRB CAMABSerra dos Aimores (MG)-Cachoeira da MataMahondaLlanosVilla GarzonArmenia. Quindio, ColombiaMarataizes (ES)LiupoLaje (BA)-Rio de Areia 1MigoriWakisoCruz das Almas (BA)-UFRB-PP1GbarpoluEketPuerto CaicedoBarranca De Upia. Casanare, ColombiaLa Libertad. Meta, ColombiaLaberinto. Sucre, ColombiaCrossRiverMondomoLondrina (PR-Afapo)Teixeira de Freitas (BA)El Carmen. Bolivar, ColombiaMimoso do Sul (ES)CarimaguaTay NinhBayelsaValledupar. Cesar, ColombiaPonta Pora (MS)-Assentamento ItamaratiMogincualBuenaventuraBouakeItiuba (BA)San PabloKisesa-MaguEl SaladoDewoinBanteay Meanchey province Banteay MeancheyMulunguMsambweniNgabuCandelaria. Valle, ColombiaAlagoinhas (BA)-Boa UniaoNecocliCaloto. Cauca, ColombiaCabuyaro. Meta, ColombiaIkenneSan MartinSoeng Sang is a district in the southeastern part of Nakhon Ratchasima provinceInhambupe (BA)-BotelhoThateng district, Sekong provinceBuga. Valle, ColombiaCantaclaroS. de QuilichaoCorozal. Sucre, ColombiaNational Corn and Sorghum Research Center (Suwan Farm), Kasetsart University Nakhon Ratchasima provinceLuruaco. Atlantico, ColombiaLa Libertad. Meta, ColombiaIlesaPend. , ColombiaCerete. Cordoba, ColombiaVijes. Valle, ColombiaNaCRRI, Central UgandaLa UnionRokuprUnknownunknown2MbararaAugusto Correa (PA)MuhangaAzuaRwebitabadavieNiaouliJamundiChamkar Leu districtBarranquillaAtivemeNgettaGranada. Meta, ColombiaCampecheJosIBARAPAEl Carmen de BolivarChambeziMomil. Cordoba, ColombiaFrancisco PizarroSatiro Dias (BA)-Assentamento PapagaioPalmaseca. Valle, ColombiaLaje (BA)-Novo Horizonte 2ASan PedroCienaga De Oro. Cordoba, ColombiaMalam MadoriKumasiKamaConde (BA)-HumaitaRepelon. Atlantico, ColombiaNecocli. Antioquia, ColombiaCorpoica PalmiraBetuliaLaje (BA)-Rio de Areia 2MocubaNigerDanyiTororoKizimbaniFonseca. Guajira, ColombiaOshogboKaomaPitalito. Atlantico, ColombiaLaberintoAdetaSantaguedaKakamegaTchadNsukkaCabuyaroNamulongeKubwaIRRUADong NaiLa LibertadLaje (BA)-Fazenda Sao JorgekaseseBaranoaPalmar de Varela. Atlantico, ColombiaMatazul. Meta, ColombiaBwangaKisumuPescador. Cauca, ColombiaLaje (BA)-RogerioSahagun. Cordoba, ColombiaSabanalarga. Atlantico, ColombiaNgettaCarranzo. Cordoba, ColombiaMoralesSampuesChinuPouso Alegre (MG)Cajibio. Cauca, ColombiaLaje (BA)-Novo Horizonte 1YangambiNebbiPokuaseDaklakMorales. 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   No Locations Selected
   Trial Name:

   Location abbreviation will automatically be added as a prefix if multiple locations are selected.

   Trial Type:
   Year:
   Planting Date:
   Plot Width (m):
   Plot Length (m):
   Field Size (ha):
   Plants per Plot:

   Creates plant entries for each plot. Ignore if not adding plant entries.

   Inherits Management Factor(s) From Plots:
   Description:
   Stock Type Being Evaluated in Trial:

   Select a stock type accession cross family_name
   Design Type:

   Completely Randomized Complete Block Resolvable Row-Column Doubly-Resolvable Row-Column Augmented Row-Column Alpha Lattice Lattice Augmented Modified Augmented Design Nursery/Greenhouse Split Plot Strip Plot Partially Replicated Westcott

   Usage Help
   Use same randomization for all locations:
   First validate the form Continue to Next Step

3. Design your trial layout

   Which accessions will be in the field?

   List of accessions to include (required):

   Which crosses will be in the field?

   List of crosses to include (required):

   Which family names will be in the field?

   List of family names to include (required):

   Name of Check 1:

   Name of Check 2:

   List of checks to include (required):

   List of checks to include (required):

   List of checks to include (required):

   List of checks to include. Checks list should be separate from accessions list. (optional):

   List of checks to include. Checks list should be accessions list. (optional):

   List of checks to include. Checks list should be accessions list. (optional):

   List of unreplicated accession (required):

   List of unreplicated cross (required):

   List of unreplicated family_name (required):

   List of replicated accession (required):

   List of replicated cross (required):

   List of replicated family_name (required):

   Need to create a list?    Manage Lists
   Number of rows in design:
   Number of columns in design :
   Number of times replicated accessions are replicated:
   Block sequence:
   Sub-block sequence:
   Default Number of Plants:

   Number of Plants:

   Number of Columns (required):

   Number of columns between two check columns (Optional):
   Number of replicates (required):

   Number of blocks (required):

   Number of field rows (Required):

   Number of Columns (Required):

   Number of Columns per Block (2 or 4):

   Number of Rows Per Block (Optional):

   Subplot 1 Treatment Name:

   Subplot 2 Treatment Name:

   Subplot 3 Treatment Name:

   Subplot 4 Treatment Name:

   Add Another Treatment:

   + Treatment

   Number of Plants Per Treatment (required):

   Show optional parameters:

   Column number per block:

   Number of field columns:

   Block size (required):

   Maximum block size (required):

   Which seedlots will you grow in the field?
   This is optional and can be decided later. If you do not know exactly which seedlot packets you will be planting at this time, you can add this information on the Trial Detail Page after the trial has been saved in the database.

   List of seedlots for selected accessions (optional):

   Number of seeds per plot (required if seedlot list given):

   Need a list of seedlots for the selected accessions?    Search Seedlots for Accessions
   
   Continue to Next Step

4. Is your trial linked with other field trials, genotyping plates, or crossing experiments in the database? If you are unsure, you can skip this. This information can be added from the trial detail page after the trial is saved.

   
   
   Is this trial following-up a previous field trial?:

   No Yes

   Select the trial(s) which preceded this trial:

   If you go on to collect tissue samples for creating a 96 well plate for genotyping, when adding the genotyping plate (96 well plate layout) to the database you can use plot names or plant names or tissue sample names from this field trial. By doing so, we can create linkage between this field trial and the genotyping plate.

   Will this trial be genotyped?:

   No Yes

   If you go on to perform crosses on this field trial, each cross can be linked to specific female and male plots. When you upload these crosses we can then automatically link this field trial to the crossing experiment in the database.

   Will crosses be done on this trial?:

   No Yes
   
   Continue to Next Step

5. Specify the number of rows and columns for the entire field

   By default field map display is set to serpentine and uses the block or rep number as row number.

   If you do not want to create field map along with this trial, set 'Plot layout format' to 'select plot layout format'.

   If you do not know exactly in which rows and columns you will end up planting the plots, do not provide this and go to the next step.

   If you will plant your plots in an irregular (non-rectangular) layout, do not provide this and go to the next step.

   You can upload the exact row and column information for your plots (in any layout shape) on the Trial Detail Page after you have created the trial in the database and actually planted the experiment.

   Field map display:

   (comes with design)
   Field map display:
   Number of rows (required):

   Plot layout format:

   select plot layout format Zigzag(unserpentine) Serpentine
   
   Continue to Next Step

6. If you want to change the way in which plot names will be generated by the database

   It is recommended to allow the database to create the plot prefixes, so leave the prefix blank unless necessary.

   Custom plot naming/numbering:
    

   block based plot numbers (increment leading digit for every block)

     consecutive plot numbers throughout the blocks

   Plot prefix:

   Plot start number:

   1 101 1001

   Plot number increment:
   
   Continue to Next Step

7. Review the generated trial layout. Make sure to click Submit at the bottom of this page if you approve of the trial!

   Check to confirm that your design looks good. If there are any problems you can redo the randomization step.

   
     

   • Even Block Numbers (e.g. 2,4,...)
   • Odd Block Numbers (e.g. 1,3,...)
   • Checks
   • Odd Rep Numbers (e.g. 1,3,...)
   • Even Rep Numbers (e.g. 2,4,...)

   No field map to display...
   
   Redo Randomization

   Trial Is Valid
   The following trial will be added

   
   Add Field Management Factor(s) to Design Confirm (Saves Trial In Database)

1. This workflow will guide you through uploading genotypes into the database

   Select a genotyping project on the next screen. This project can represent a series of genotyping plates sent to a genotyping facilty.

   Ideally the sample names in your VCF file will match sample names in genotyping plates in the database; however, the sample names in your file can also match accession names in the database.

   Curently we support the VCF format, the Tassel HDF5 format, the Intertek CSV format, KASP data and SSR data for upload.

   If you are uploading many files that used the same genotyping protocol, you can do so, and the database will ensure that the marker information is consistent across the genotyping data (e.g. the same reference, alternate, position, etc.).

   
   
   Go to Next Step

2. Select the type of genotyping data being uploaded

   Type of genotyping data:

   Select data type VCF Tassel HDF5 Intertek KASP (csv) SSR
   
   
   Go to Next Step

3. Select the genotyping project or create a new one. A genotyping project is a specific genotyping event. You can have many genotyping projects under the same genotyping protocol to indicate that those genotyping events used the same markers.

   Select	Genotyping Project Name	Description	Breeding program	Year	Location	Genotyping Facility

   My project is not here. Create a new one.
   
   Genotyping Project Name:
   Should match Vendor Project if you have one

   Genotyping Facility:

   None Cornell IGD DArT Intertek IBRC Japan BGI

   Breeding Program:

   Year:

   Description:
   
   Go to Next Step

4. Provide info about the genotyping protocol used. The genotyping protocol represents a specific instance of how genotypes were called for a set of markers in a genotyping platform. Many genotyping projects can use the same genotyping protocol.

   Select	Protocol Name	Header Description	Number of Markers	Protocol Description	Reference Genome	Species	Sample Unit	Create Date

   My protocol is not here. Create a new one.
   
   Genotyping Protocol Name:

   Genotyping Protocol Reference Genome:

   Species:

   Assay Type

   Select assay type GBS KASP SSR

   Description:

   Choose Sample Unit:

      Exported Tissue Sample Name: The sample names in your VCF are tissue_sample_names that already exist in genotyping plates (e.g. 96 well plates) or sampling trials in the database. The sample names in your VCF file can be the tissue_sample_name triple pipe joined to the accession_name (e.g. tissue_sample_name|||accession_name) or just simply the tissue_sample_name corresponding to the genotyping plate well or sampling trial sample. This is the recommended format.
   
      Accession: The sample names are of accession names
   
      Mixed Stocks: The sample names are a mix of accession names or plot names or sample names or other stock names. This is not recommended because it will lead to messy sample metadata.
   Location of Data Generation:

   Exported Tissue Sample Names Include Numbers Generated by Genotyping Facility (e.g. sample_name:IGD1001:09):
   The generated number is separated from the tissue sample name in the database by a ':' separating character.
   
   Go to Next Step

5. Provide genotype information

   
   
   
   Type of Genotype Data:
   Ignore any possible warnings and upload genotypes?:

   No Yes

   File format information VCF format

   
   

   Select VCF File:

   File format information VCF format

   
   

   Select Tassel HDF5 (.h5) File:

   File format information Intertek format

   
   

   Select Intertek SNP Result Grid File:

   Select Intertek SNP Information File:

   File format information KASP data format

   
   

   Select KASP Marker Information File (csv):

   Select KASP Result File (csv):

   File format information SSR format

   
   

   Select SSR File:
   
   
   Check File Type Go to Next Step

6. Finalize and submit your genotyping data

   Add these missing stocks as new accessions?:

   No (currently disabled for safety)
   Submit

7. Complete! Your genotyping data was saved in the database.

   The genotyping data was saved successfully

   
   

1. This workflow will guide you through adding a genotyping plate in the database

   Genotyping plates represent 96 or 384 well plates.

   Each plate has a globally unique Plate ID.

   Each well in the plate has a globally unique tissue sample ID.

   The "contents" of each well can be either a tissue sample, plant name, plot name, or accession name. This "source" name must be in the database already. This is useful if you provide a field trial entity (such as a plot or plant or tissue sample name), so that phenotypes and genotypes can be directly compared.

   If you choose to submit your genotyping plate to a genotyping facility (Cornell IGD, Intertek, BGI, etc) we can generate the files they require for you. Please be aware of their requirements, such as blank well positions and concentrations.

   In addition to sample ID, you have an option to include facility identifier for each well.

   
   
   Go to Next Step

2. Select a genotyping project

   Genotyping projects are for grouping genotyping plates and/or genotyping data together. Genotyping Project should match Vendor Project if you have one.

   If you need to create a genotyping project, click here
   
   Once you have a genotyping project, go to Next Step

3. Provide info about your plate

   Genotyping Project Name:
   Genotyping Plate ID:
   -In Coordinate App this is called "Plate Name"
   -This is the globally unique name of the plate
   Plate Format:

   96 Well 384 Well
   Sample Type:

   DNA RNA Tissue
   Genotyping Plate's Description (optional):
   Include Identifiers Generated by Genotyping Facility
   (only for upload options):
   
   
   Go to Next Step

4. Provide information about the wells in your plate

   
   
   Select One:

   Select a file format that you want to upload I am uploading a plate design I made in Excel I am uploading a Default Coordinate Android Application plate design I am uploading a Custom Coordinate Android Application plate design I need to design a completely new plate
   
   
   

   You want to upload an existing plate layout

   File format information Spreadsheet format

   
   

   Select Plate Layout XLSX File:

   You want to upload a Coordinate Android Application file.

   File format information Spreadsheet format

   
   

   Select Coordinate CSV File:

   You want to upload a Custom Android Application file.

   File format information Spreadsheet format

   
   

   Select Coordinate CSV File:

   You want to design a completely new plate.

   • Select a list for the source material going into each well. Your list should be a one to one pairing to each well e.g. if you want to fill 95 wells you should supply a list of 95 elements.
   • Note: From the most desirable to least desirable source observation unit you can choose: tissue samples, plants, plots, or accessions

   Source Observation Unit List:

   [loading...]

   
   
   

   Optional Blank Well: (Cornell IGD requires a specific well to be blank.)

   
   

   Optional Well Concentration (ng/ul): (If you used the same conc for all wells)

   
   

   Optional Well Volume (ul): (If you used the same vol for all wells)

   
   

   Optional Tissue: (If used the same tissue for all wells)

   Leaf Root Stem Seed Fruit Tuber

   
   

   Optional NCBI Taxonomy ID: (Official NCBI ID.)

   
   

   Optional Extraction: (If used the same extraction for all wells)

   
   

   Optional Person: (If same person prepared all wells.)

   
   

   Optional Date: (If plated on same date. YYYY/MM/DD)

   
   

   Optional Notes: (Additional notes for these wells.)
   
   
   Go to Next Step

5. Is your genotyping plate linked with field trials in the database? This information can also be added from the genotyping plate detail page once the trial is saved in the database.

   If you provided us with information about where the tissue sample in each well originated (e.g. it came from a plot name or plant name or tissue sample name in a field trial), we will automatically create linkage between the field trial(s) and this genotyping plate.

   
   Continue to Next Step

6. Finalize and submit your genotyping plate

   Automatic submission to the Genotyping Facility currently not working. You can submit it from the Genotyping Plate's detail page or download the information from the Genotyping Plate's detail page and submit it yourself after clicking Submit

   Submit

1. What is a seedlot inventory?

   • Seedlots represent physical seed in packets.
   • This seed can be from crosses or for named accessions.
   • Seedlots can have a specific location, box, weight(g), and count.
   • Seedlots can belong to breeding programs and organizations.
   • Seedlots can be used in trials (e.g. they were planted in a plot) and they can be harvested from a plot or plant (e.g. a cross was performed and seeds were collected.)
   • A seedlot inventory consists of giving a location and current weight(g) to your seedlots. The seedlot name is the unique identifier for each seedlot and so should be encoded in a barcode on each seedlot packet.
   • You can use the "Inventory" Android Application to scan seedlot barcodes and record weight. If you prefer you can create your own CSV file and upload that, if you do not want to use the Inventory Application. For info about the format of the file to upload, go to the next tab.
   • It is also possible to manually enter a transaction by going to the seedlot detail page and clicking "Add New Transaction".
   
   
   Go to Next Step

2. Make sure you are collecting seedlot inventory in the following format

   The "Seed Inventory" Android Application will export this same exact format by default.

   
   
   Info about file format
   
   Once you think your file matches, go to Next Step

3. Select your file and upload seedlot inventory

   Upload File (.csv):
   
   
   Submit

4. Fixing the missing seedlot(s) problem

   • Seedlots must exist in the database prior to updating or adding inventory. The reason for this is that the inventory does not give information about the content (a named accession or a cross name) and this information is required for a seedlot to exist in the database. We also want to be careful about adding new seedlots into the database because we do not want data to be incorrectly linked to duplicates.

   • When adding seedlots into the database, you can upload an Excel file or you can add seedlots one at a time.
     
     
     • Upload Excel file
       
       
     • Add One Seedlot

   
   Once all your seedlots are in the database Click Here
   
   

   Seedlot Inventory Upload Error Messages

5. Submit your inventory again. You should have corrected all errors by now, but if not please take a look at the errors in the red box below. You can continue to modify your file and then click Upload until it works.

   Upload Seedlot Inventory
   
   

   There exist these problems in your file:

1. What are seedlots?

   • Seedlots represent physical seed in packets.
   • This seed can be from crosses or for named accessions.
   • Seedlots can have a specific location, box, weight_gram, and count.
   • Seedlots can belong to breeding programs and organizations.
   • Seedlots can be used in trials (e.g. they were planted in a plot) and they can be harvested from a plot or plant (e.g. a cross was performed and seeds were collected.)
   
   
   Go to Next Step

2. Seedlots fall into two categories

   Select One:

   I have seed lots for named accessions I have seed lots harvested from crosses
   
   
   
   
   Go to Next Step

3. Make sure your file matches the correct file format

   
   
   
   Information about file format for uploading seedlots of named accessions
   
   
   Information about file format for uploading seed lots harvested
   
   
   Once you think your file matches, go to Next Step

4. Provide basic information about the seedlots and upload your file

   Breeding Program:
   Location of seedlot storage:
   Organization Name:
   Upload File:
   Upload File:
   Upload Seedlots
   
   

5. Fix all errors in your file

   • Accessions must exist in the database prior to adding seedlots of them. The reason for this is that an accession can be exist in many seedlots and therefore exists as a separate entity in the database. We also want to be careful about adding new accessions into the database because we do not want incorrectly duplicated data.
   • When adding accessions into the database, you can use either a list of accessions or an Excel file.

   Add your accessions to the database
   
   Once all your accessions are in the database Click Here
   
   

   • Crosses must exist in the database before adding your seed lots. The reason for this is that a cross can produce many seed lots and so the cross must exists as a separate entity in the database. We also want to be careful about adding new crosses into the database because we do not want data to be incorrectly linked to duplicates.

   • When adding crosses into the database, you can upload an Excel file or you can add seedlots one at a time.
     
     
     • Upload Excel file
       
       
     • Add One Cross

   
   Once all your crosses are in the database Click Here
   
   

   Seedlot Upload Error Messages

6. Submit your seedlots again. You should have corrected all errors by now, but if not please take a look at the errors in the red box below. You can continue to modify your file and then click Upload until it works.

   Upload Seedlots
   
   

   There exist these problems in your file:

OR

1. Introduction

   • Crosses can be of different types (biparental, self, open, backcross, sib, polycross, bulk, bulk_open, bulk_self, doubled_haploid, or dihaploid_induction)
   • cross type descriptions:
   • biparental: An individual plant pollinated by another individual plant.
   • self: A self pollinated individual plant.
   • open: An individual plant pollinated by a group of plants or open pollinated (pollen may be from a group with known or unknown members).
   • backcross: An individual plant pollinated by one of its parents. Cross Unique ID can be used as one of the parents.
   • sib: Mating between individuals that have at least one parent in common. Generally between two individuals within the same plot.
   • polycross: Mating between individual female parent from a population and the corresponding male population.
   • bulk: A group of plants (usually a related family) pollinated by an individual plant (between a female population and a male accession).
   • bulk_open: A group of plants (usually a related family) that are pollinated by another group of plants or open pollinated (between a female population and a male population or unknown male parent).
   • bulk_self: A group of plants (usually a related family) that are self pollinated (each individual selfed, not combined pollen).
   • doubled_haploid: Plants derived from doubling the chromosome number of haploid tissue.
   • dihaploid_induction: Plants derived from reducing the chromosome set from tetraploid to diploid.
   • An individual cross can be linked to a female plot or plant, as well as a male plot or plant.
   • A cross can have a number of properties associated to it, such as number of flowers, pollination date, etc.
   • A cross can produce seed, which goes into a seedlot.
   • A cross can ultimately produce progeny, which then become named accessions in the database.
   
   
   Go to Next Step

2. Select a crossing experiment for your crosses

   If you are uploading an Intercross file and using auto-generated cross unique IDs, please use manage Intercross section
   
   

   Crossing experiments are for grouping crosses together. The grouping is most often done for crosses derived from the same field trial, the same year, or for crosses that have the same breeding objective.

   If you need to create a new crossing experiment, click here
   
   If you already have a crossing experiment, go to Next Step
   You are uploading crosses for crossing experiment:

   
   
   
   
   Go to Next Step

3. Enter basic information about the crosses and upload your file

   
   
   Breeding Program:

   
   

   Crossing Experiment:
   Crossing Experiment:

   File format information Spreadsheet format

   
   

   Upload File:

   Crosses may be uploaded using any of the supported file types: MS Excel (.xls or .xlsx), comma-separated file (.csv), tab-delimited file (.txt or .tsv), or semicolon-separated file (.ssv).

   Upload File

1. What is a cross?

   • The Cross Tool can track any pollinations in a breeding program.
   • Each cross has a globally unique cross id.
   • Supported cross types are: biparental, self, open, backcross, sib, polycross, bulk, bulk_self, bulk_open, doubled_haploid, or dihaploid_induction
   • For an open pollinated cross, the cross can be defined as between female accession A and male population P1 (populations in the database are defined strictly as groups of accessions). If the male parent is not known, it can be left blank.
   • For backcross cross type, cross unique id can be used as one of the parents.
   • An individual cross can be linked to the specific female plot or plant, as well as to the specific male plot or plant.
   • A cross can have other data associated to it, such as number of flowers, pollination date, etc.
   • Seed produced by a cross can be managed using a seedlot.
   • Progenies from a cross can become named accessions in the database.
   
   Go to Next Step

2. Select a crossing experiment

   Crossing experiments are for grouping crosses together. The grouping is most often done for crosses derived from the same field trial, the same year, or for crosses that have the same breeding objective.

   If you need to create a crossing experiment, click here
   
   Once you have a crossing experiment, go to Next Step

3. Enter basic information about the cross

   Cross type information Descriptions of cross types

   Breeding Program:
   
   
   
   Crossing Experiment:
   
   
   
   Cross Unique ID:
   
   
   
   Cross Combination (optional):
   
   
   
   Cross Type:

   Select a cross type biparental self open pollinated backcross sib bulk bulk selfed bulk and open pollinated doubled haploid dihaploid induction polycross reciprocal multicross
   
   
   Go to Next Step

4. Enter basic information about the cross

   Female Parent:

   
   
   
   Male Parent:

   
   
   
   Selfed Parent:

   
   
   
   Female Parent:

   
   
   
   Male Population: (optional)

   
   
   
   Female Population:

   
   
   
   Male Parent:

   
   
   
   Selfed Population:

   
   
   
   Female Population:

   
   
   
   Male Population: (optional)

   
   
   
   Doubled Haploid Parent:

   
   
   
   Dihaploid induction Parent:

   
   
   
   Accessions to use in Polycross:

   
   
   
   Accessions to use in Reciprocal cross:

   
   
   
   Multicross Female Parents:

   
   
   
   Multicross Male Parents:

   
   
   

   Optional: If you choose to record exact cross parents, you can do so.

   Field Trial:

   Search Plots/Plants

   
   
   

   Female Plot/Plant:

   Enter trial name first

   
   
   

   Male Plot/Plant:

   Enter trial name first

   
   
   

   Optional: If you choose to record exact cross female parent, you can do so.

   Field Trial:

   Search Plots/Plants

   
   
   

   Female Plot/Plant:

   Enter trial name first

   
   
   
   
   Go to Next Step

5. If you would like to add auto-generated progeny names for this cross, you can add it here

   Optional:

   Add New Accessions for Progeny:	Number of progeny:
   Use Prefix and/or Suffix:	Prefix: Suffix:

   
   Submit Cross

1. What are crossing experiments?

   Crossing experiments group crosses. The grouping can reflect crosses done in the same field trial, crosses in a breeding program in a given year, or crosses that have the same breeding objective. This grouping can be used to encapsulate all the crosses done in a crossing block field trial that you have saved in the database (e.g. in Manage Trials your crossing block will appear as a field trial with plots)

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2. Enter basic information about the crossing experiment

   
   
   Crossing Experiment Name:
   
   
   
   Breeding Program:

   Select Breeding Program 5CPBTICARICHCIATCIP-genebankCNRACornellCSIR-CRIEmbrapaIDIAFIITAINERA_IITA_DRCISABUITCKALROKUNaCRRINRCRIRayongSLARITARIUACUHUNILA-IndonesiaZARI
   
   
   
   Location of crossing experiment:

   Select Location RestrepoIgbariamRayongGranadaSanto Tomas. Atlantico, ColombiaFlorenciabwangaNaliendeleKokrokoChokweCalabarJaguaripe (BA) - Fazenda EsperançaCorozal. Sucre, ColombiaAgborSuakokoKibahaIshiaguBarahonaNjalaSotoubouaBuenos AiresAlbaniaItanhem (BA)IlorinAcacias. Meta, ColombiaVerdelandia (MG)-Brasnica Fazenda OrienteCIATDarien. Valle, ColombiaEl Espinal. Tolima, ColombiaTerra Alta (PA)Kano[Computation]Puerto Caicedo. Putumayo, ColombiaFlorestal (MG) - UFV Campus FlorestalLUWEEROMatazulAkwa IbomLaje (BA)-RoqueEjuraVilla Garzon. Putumayo, ColombiaLuruacoHomboloQuilcace. Cauca, ColombiaTumacoCaribiaOvejasMomilLomeMukonoSabanagrandeBlamaSao Mateus (ES)KiggumbaNjuliMakokaZariaIbadanArmeroZomboAnlong Veng District, Oddar Meanchey provinceMutata. Antioquia, ColombiaAguazulValencia. Cordoba, ColombiaQuang NgaiAgustin CodazziMakeniKabalaNametilPalmiraBolivarKwaraKazilamuyagaTamalameque. Cesar, ColombiaBaranoa. Atlantico, ColombiaEsplanada (BA) - CachoeiraUkereweNhacoongoLaje (BA)-GaviaoMangabeira (BA)-IF BaianoGairoBuginyanyaMarukuMtwapa2Varzedo (BA)UmbeluziSao Francisco de Itabapoana (RJ)-Industria Dona ChicaPolonuevoBukembaRufunsaCampos Novos Paulista (SP)-Tereos SyralOgoniInharrimeBulingaUyoEmbuBarrancabermejaDarienCereteFumesuaSiayaCarimagua. Meta, ColombiaMacapa (AP)SabanalargaEl Overo. Valle, ColombiaCaldonoPallisaSabanalarga. Atlantico, ColombiaKhao Hinsorn Research Center, Kasetsart University, Chachoengsao provinceRatanak Mondul district, Battambang provinceMasakaEl Olivo. Cordoba, ColombiaApiayVitoria da Conquista (BA) - Fecularia ConquistaMvuaziKaberamaidoSulutiSan Vicente. Santander, ColombiaMontenegro. Quindio, ColombiaTouros (RN)-PrataBusiaunspecifiedMutataSanta CruzUniversity of HawaiiAkureOhawuCarepaLirakasuluApiay. Meta, ColombiaBugaPetrolina (PE)-UNIVASFPatiaMichikichiniItasyAgo-OwuPopayanDoncello. Caqueta, ColombiaDivoPajau. Brasil, BrazilQuilcaceFlorencia. Caqueta, ColombiaChiengiTangakonaOtobiMontenegroPuerto GaitanBarranquilla. Atlantico, ColombiaCorozalPinheiros (ES)MontanitaJeddoLao NgamSikhiu is a district (amphoe) in the western part of Nakhon Ratchasima provinceCienaga. Magdalena, ColombiaBela Vista de Goias (GO)TolúMarechal Candido Rondon (PR)-ATIMOPEl EspinalHoma BayArmeniaTESTKisesaAssin FosuBundaYopal. Casanare, ColombiabadagryObuduNaphokLa Dolores. Valle, ColombiaNamulonge-SendusuSenjehSampues. Sucre, ColombiaCajibioCoração de Maria (BA)GongoniLa HormigaRakaiPalmasecaChitedzeLoricaCruz das Almas (BA)-UFRB-CandealMargibiTracuateua (PA)TolúviejoPopayan. Cauca, ColombiaAcaciasTauramenaKipopoAgbarhoCIAT. Valle, ColombiaNgandajikaMkurangaOrito. Putumayo, ColombiaPuerto Asis. Putumayo, ColombiaCumaral. Meta, ColombiaRubiriziBuikweKalomoSan Martin. Meta, ColombiaMityanaOsunKiyakaPivijaySinceMontanita. Sucre, ColombiaConde (BA)-CanguritoNyankpalaVitoria da Conquista (BA)Prado (BA)MbuniHung YenLaje (BA) - Fazenda Sombra VerdeDeltaBoyce Thompson InstitutePitalitoKasinthukaPuerto AsisMorogoroMkondeziAbujaMonteria (UNICORDOBA). Cordoba, ColombiaWenchiSan VicenteCaracoli. Atlantico, ColombiaMokwaKebbiAlupeCapanema (PA)RubonaChatoCalotoUsiacuriSanta Cruz. Atlantico, ColombiaLa Hormiga. Putumayo, ColombiaMonteriaLaje (BA)-Rio de Areia 1Rio Frio. Magdalena, ColombiaTeresina (PI)OnneOrtegaIresiYopalFonsecaKabangweCaracoliEl Salado. Cordoba, ColombiaPuerto LopezLagoa D'Anta (RN)ManLagoa D'anta (RN)-LopesKWALEPuerto Gaitan. Meta, ColombiaConceicao dos Ouros (MG)Pojuca (BA)RiversMedia Luna. Magdalena, ColombiaFadaInaAremasain. Guajira, ColombiaBambiLukwakwaMalambo. Atlantico, ColombiaCornell BiotechChilimbaLoroSerereRio FrioDoncelloPalmar de VarelaMogovolasFumesua-KumasiSan Antonio de PalmitoSon LaMtwapaWarriNachingweaBulegeniVerdelandia (MG)-Brasnica Fazenda VilyamaZanzibarTapioca Development Institute (TDI), located in Huay Bong, Dan Khun Thot District, Nakhon RatchasimaPhu YenJamundi. Valle, ColombiaMalamboPureza (RN)Puerto Lopez. Meta, ColombiaFarakobaHanoiNgomaKasuluSevillaItamaraju (BA)Ban Khao Luk Chang, Ta Phraya Sistrict, Sa Kaeo provinceCienagaS. de Quilichao. Cauca, ColombiaEl MiraEdoGuanambi (BA)-IF BaianoCruz Das Almas (BA) - UFRB CAMABSerra dos Aimores (MG)-Cachoeira da MataMahondaLlanosVilla GarzonArmenia. Quindio, ColombiaMarataizes (ES)LiupoLaje (BA)-Rio de Areia 1MigoriWakisoCruz das Almas (BA)-UFRB-PP1GbarpoluEketPuerto CaicedoBarranca De Upia. Casanare, ColombiaLa Libertad. Meta, ColombiaLaberinto. Sucre, ColombiaCrossRiverMondomoLondrina (PR-Afapo)Teixeira de Freitas (BA)El Carmen. Bolivar, ColombiaMimoso do Sul (ES)CarimaguaTay NinhBayelsaValledupar. Cesar, ColombiaPonta Pora (MS)-Assentamento ItamaratiMogincualBuenaventuraBouakeItiuba (BA)San PabloKisesa-MaguEl SaladoDewoinBanteay Meanchey province Banteay MeancheyMulunguMsambweniNgabuCandelaria. Valle, ColombiaAlagoinhas (BA)-Boa UniaoNecocliCaloto. Cauca, ColombiaCabuyaro. Meta, ColombiaIkenneSan MartinSoeng Sang is a district in the southeastern part of Nakhon Ratchasima provinceInhambupe (BA)-BotelhoThateng district, Sekong provinceBuga. Valle, ColombiaCantaclaroS. de QuilichaoCorozal. Sucre, ColombiaNational Corn and Sorghum Research Center (Suwan Farm), Kasetsart University Nakhon Ratchasima provinceLuruaco. Atlantico, ColombiaLa Libertad. Meta, ColombiaIlesaPend. , ColombiaCerete. Cordoba, ColombiaVijes. Valle, ColombiaNaCRRI, Central UgandaLa UnionRokuprUnknownunknown2MbararaAugusto Correa (PA)MuhangaAzuaRwebitabadavieNiaouliJamundiChamkar Leu districtBarranquillaAtivemeNgettaGranada. Meta, ColombiaCampecheJosIBARAPAEl Carmen de BolivarChambeziMomil. Cordoba, ColombiaFrancisco PizarroSatiro Dias (BA)-Assentamento PapagaioPalmaseca. Valle, ColombiaLaje (BA)-Novo Horizonte 2ASan PedroCienaga De Oro. Cordoba, ColombiaMalam MadoriKumasiKamaConde (BA)-HumaitaRepelon. Atlantico, ColombiaNecocli. Antioquia, ColombiaCorpoica PalmiraBetuliaLaje (BA)-Rio de Areia 2MocubaNigerDanyiTororoKizimbaniFonseca. Guajira, ColombiaOshogboKaomaPitalito. Atlantico, ColombiaLaberintoAdetaSantaguedaKakamegaTchadNsukkaCabuyaroNamulongeKubwaIRRUADong NaiLa LibertadLaje (BA)-Fazenda Sao JorgekaseseBaranoaPalmar de Varela. Atlantico, ColombiaMatazul. Meta, ColombiaBwangaKisumuPescador. Cauca, ColombiaLaje (BA)-RogerioSahagun. Cordoba, ColombiaSabanalarga. Atlantico, ColombiaNgettaCarranzo. Cordoba, ColombiaMoralesSampuesChinuPouso Alegre (MG)Cajibio. Cauca, ColombiaLaje (BA)-Novo Horizonte 1YangambiNebbiPokuaseDaklakMorales. Cauca, ColombiaNyagatareMontanha (ES) - Fecularia ConquistaKibaaleBarranca De UpiaEl OveroArmero. Tolima, ColombiaCarepa. Antioquia, ColombiaSahagunLa Union. Sucre, ColombiaAlcobaca (BA)KilibaBetulia. Sucre, ColombiaAlbania. Sucre, ColombiaKaseseCIAT. Valle, ColombiaAbidjanPendembuMsabahaBarrancabermeja. Santander, ColombiaChinu. Cordoba, ColombiaUkiriguruOritolossaVijesLaje (BA)-Novo Horizonte 2BBolikham district, Bolikhamxay provinceCruz Das Almas (BA)-CNPMF-Area 2DamongoPatia. Cauca, ColombiaUmudikeRestrepo. Meta, ColombiaNeivaCostaRepelonSanto TomasChitalaEntre Rios (BA)ChochoLaje (BA) - CapelaQuissama (RJ)-PMQ HortoKadunaweBom Jesus da Lapa (BA) - IF BaianoEkitiPitalito. Atlantico, ColombiaOgutaNong Yai is a district in the province ChonburiCandelariaMolineros. Atlantico, ColombiaPescadorWenchi-BALa CumbreLaje (BA) - RailtonSanta Isabel do Para (PA)Santo Tomas. Atlantico, ColombiaMedia LunaEl OlivoTauramena. Casanare, ColombiaCumaralCaribia. Magdalena, ColombiaValleduparFloridaMondomo. Cauca, ColombiaMotiloniaAguazul. Casanare, ColombiaLaje (BA)-Novo RumoCienaga De OroStung Treng Province, Stung TrengPokuase-AccraEuclides da Cunha (BA)AKUMADANCruz Das Almas (BA) - UFRB - EstabuloAremasainLaje (BA)-Novo Horizonte 1AKibosKamuliLa DoloresAlagoinhas (BA)COLDStore, RACK1, Shelf2, Cruz Das Almas (BA) CNPMF - CitrusRuziziPlainIkot AfangaBengouPivijay. Magdalena, ColombiaKogiAruaAgenbodeValenciaNatagaimaCampos dos Goytacazes (RJ)-UENFILONGABundibugyoEgbemaKakonkoMubendeSanto Amaro (BA)BarrancasCachoeira de Minas (MG)Dourados (MS)-UFGDDOKOLOCruz Das Almas (BA) - CNPMF - Area 1 (Ladeira maracuja)Los PalmitosibadanGinebraMansaUbiaja
   
   
   
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